Cluster: HRGMv2_1924_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1924
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1924_11 | HRGMv2_1924_11_10 | 9116 | 10447 | + | GH4 |
| NULL(UNKNOWN) | HRGMv2_1924_11 | HRGMv2_1924_11_11 | 10461 | 11069 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1924_11 | HRGMv2_1924_11_12 | 11354 | 12700 | + | 2.A.66.1.32 |
| TC | HRGMv2_1924_11 | HRGMv2_1924_11_13 | 12716 | 13936 | - | 2.A.36.2.1 |
| STP | HRGMv2_1924_11 | HRGMv2_1924_11_14 | 14313 | 14834 | + | Nitroreductase |
| pfam | HRGMv2_1924_11 | HRGMv2_1924_11_15 | 14927 | 16363 | + | Collagen | Collagen | Collagen |
| CAZyme | HRGMv2_1924_11 | HRGMv2_1924_11_16 | 16404 | 17462 | + | GT2 |
Gene ID: HRGMv2_1924_11_10
Type: CAZyme
Location: 9116 - 10447 (+)
Type: CAZyme
Location: 9116 - 10447 (+)
Gene ID: HRGMv2_1924_11_11
Type:
Location: 10461 - 11069 (+)
Type:
Location: 10461 - 11069 (+)
Gene ID: HRGMv2_1924_11_12
Type: TC
Location: 11354 - 12700 (+)
Type: TC
Location: 11354 - 12700 (+)
Gene ID: HRGMv2_1924_11_13
Type: TC
Location: 12716 - 13936 (-)
Type: TC
Location: 12716 - 13936 (-)
Gene ID: HRGMv2_1924_11_14
Type: STP
Location: 14313 - 14834 (+)
Type: STP
Location: 14313 - 14834 (+)
Gene ID: HRGMv2_1924_11_15
Type: pfam
Location: 14927 - 16363 (+)
Type: pfam
Location: 14927 - 16363 (+)
Gene ID: HRGMv2_1924_11_16
Type: CAZyme
Location: 16404 - 17462 (+)
Type: CAZyme
Location: 16404 - 17462 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.