Cluster: HRGMv2_1924_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1924
- CGC Family ID: CGCFAM_09909
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1924_9 | HRGMv2_1924_9_1 | 238 | 1455 | + | GH3 |
| pfam | HRGMv2_1924_9 | HRGMv2_1924_9_2 | 1473 | 2216 | + | SpoU_methylase | MRM3-like_sub_bind |
| TC | HRGMv2_1924_9 | HRGMv2_1924_9_3 | 2394 | 3116 | + | 3.A.1.147.6 |
Gene ID: HRGMv2_1924_9_1
Type: CAZyme
Location: 238 - 1455 (+)
Type: CAZyme
Location: 238 - 1455 (+)
Gene ID: HRGMv2_1924_9_2
Type: pfam
Location: 1473 - 2216 (+)
Type: pfam
Location: 1473 - 2216 (+)
Gene ID: HRGMv2_1924_9_3
Type: TC
Location: 2394 - 3116 (+)
Type: TC
Location: 2394 - 3116 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.