Cluster: HRGMv2_1924_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1924
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1924_4 | HRGMv2_1924_4_9 | 13130 | 14311 | + | GT4 |
| CAZyme | HRGMv2_1924_4 | HRGMv2_1924_4_10 | 14308 | 16452 | + | GT2 |
| pfam | HRGMv2_1924_4 | HRGMv2_1924_4_11 | 16436 | 17209 | + | ABC2_membrane |
| TC | HRGMv2_1924_4 | HRGMv2_1924_4_12 | 17220 | 17972 | + | 3.A.1.103.5 |
Gene ID: HRGMv2_1924_4_9
Type: CAZyme
Location: 13130 - 14311 (+)
Type: CAZyme
Location: 13130 - 14311 (+)
Gene ID: HRGMv2_1924_4_10
Type: CAZyme
Location: 14308 - 16452 (+)
Type: CAZyme
Location: 14308 - 16452 (+)
Gene ID: HRGMv2_1924_4_11
Type: pfam
Location: 16436 - 17209 (+)
Type: pfam
Location: 16436 - 17209 (+)
Gene ID: HRGMv2_1924_4_12
Type: TC
Location: 17220 - 17972 (+)
Type: TC
Location: 17220 - 17972 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.