Cluster: HRGMv2_1924_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1924
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1924_90 | HRGMv2_1924_90_41 | 41328 | 42095 | - | 3.A.1.103.4 |
| TC | HRGMv2_1924_90 | HRGMv2_1924_90_42 | 42098 | 42901 | - | 3.A.1.103.2 |
| NULL(UNKNOWN) | HRGMv2_1924_90 | HRGMv2_1924_90_43 | 42918 | 43295 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1924_90 | HRGMv2_1924_90_44 | 43292 | 45406 | - | GT4 | GT4 |
| pfam | HRGMv2_1924_90 | HRGMv2_1924_90_45 | 45403 | 46638 | - | UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | HRGMv2_1924_90 | HRGMv2_1924_90_46 | 46613 | 47353 | - | GT26 |
Gene ID: HRGMv2_1924_90_41
Type: TC
Location: 41328 - 42095 (-)
Type: TC
Location: 41328 - 42095 (-)
Gene ID: HRGMv2_1924_90_42
Type: TC
Location: 42098 - 42901 (-)
Type: TC
Location: 42098 - 42901 (-)
Gene ID: HRGMv2_1924_90_43
Type:
Location: 42918 - 43295 (-)
Type:
Location: 42918 - 43295 (-)
Gene ID: HRGMv2_1924_90_44
Type: CAZyme
Location: 43292 - 45406 (-)
Type: CAZyme
Location: 43292 - 45406 (-)
Gene ID: HRGMv2_1924_90_45
Type: pfam
Location: 45403 - 46638 (-)
Type: pfam
Location: 45403 - 46638 (-)
Gene ID: HRGMv2_1924_90_46
Type: CAZyme
Location: 46613 - 47353 (-)
Type: CAZyme
Location: 46613 - 47353 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.