Cluster: HRGMv2_1924_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1924
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1924_90 | HRGMv2_1924_90_15 | 15434 | 17185 | - | 3.A.1.120.6 |
| pfam | HRGMv2_1924_90 | HRGMv2_1924_90_16 | 17179 | 18516 | - | Methyltr_RsmB-F | FtsJ | Methyltranf_PUA | Methyltr_RsmF_N | RsmF_methylt_CI |
| pfam | HRGMv2_1924_90 | HRGMv2_1924_90_17 | 18530 | 19087 | - | DUF1836 |
| CAZyme | HRGMv2_1924_90 | HRGMv2_1924_90_18 | 19297 | 20436 | - | CE9 |
Gene ID: HRGMv2_1924_90_15
Type: TC
Location: 15434 - 17185 (-)
Type: TC
Location: 15434 - 17185 (-)
Gene ID: HRGMv2_1924_90_16
Type: pfam
Location: 17179 - 18516 (-)
Type: pfam
Location: 17179 - 18516 (-)
Gene ID: HRGMv2_1924_90_17
Type: pfam
Location: 18530 - 19087 (-)
Type: pfam
Location: 18530 - 19087 (-)
Gene ID: HRGMv2_1924_90_18
Type: CAZyme
Location: 19297 - 20436 (-)
Type: CAZyme
Location: 19297 - 20436 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.