Cluster: HRGMv2_1923_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- CGC Family ID: CGCFAM_00056
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1923_7 | HRGMv2_1923_7_1 | 333 | 1994 | + | 2.A.58.2.2 |
| TF | HRGMv2_1923_7 | HRGMv2_1923_7_2 | 2036 | 2722 | + | Trans_reg_C |
| STP | HRGMv2_1923_7 | HRGMv2_1923_7_3 | 2724 | 4121 | + | HATPase_c | HisKA |
| TC | HRGMv2_1923_7 | HRGMv2_1923_7_4 | 4337 | 5980 | + | 2.A.58.2.2 |
| CAZyme | HRGMv2_1923_7 | HRGMv2_1923_7_5 | 6244 | 10515 | + | CBM32 |
Gene ID: HRGMv2_1923_7_1
Type: TC
Location: 333 - 1994 (+)
Type: TC
Location: 333 - 1994 (+)
Gene ID: HRGMv2_1923_7_2
Type: TF
Location: 2036 - 2722 (+)
Type: TF
Location: 2036 - 2722 (+)
Gene ID: HRGMv2_1923_7_3
Type: STP
Location: 2724 - 4121 (+)
Type: STP
Location: 2724 - 4121 (+)
Gene ID: HRGMv2_1923_7_4
Type: TC
Location: 4337 - 5980 (+)
Type: TC
Location: 4337 - 5980 (+)
Gene ID: HRGMv2_1923_7_5
Type: CAZyme
Location: 6244 - 10515 (+)
Type: CAZyme
Location: 6244 - 10515 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.