Cluster: HRGMv2_1923_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1923_6 | HRGMv2_1923_6_23 | 22260 | 23000 | - | 3.A.1.17.8 |
| TC | HRGMv2_1923_6 | HRGMv2_1923_6_24 | 23011 | 23994 | - | 3.A.1.17.13 |
| TC | HRGMv2_1923_6 | HRGMv2_1923_6_25 | 24004 | 24753 | - | 3.A.1.17.6 |
| NULL(UNKNOWN) | HRGMv2_1923_6 | HRGMv2_1923_6_26 | 25039 | 25587 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1923_6 | HRGMv2_1923_6_27 | 25705 | 26844 | + | CE9 |
Gene ID: HRGMv2_1923_6_23
Type: TC
Location: 22260 - 23000 (-)
Type: TC
Location: 22260 - 23000 (-)
Gene ID: HRGMv2_1923_6_24
Type: TC
Location: 23011 - 23994 (-)
Type: TC
Location: 23011 - 23994 (-)
Gene ID: HRGMv2_1923_6_25
Type: TC
Location: 24004 - 24753 (-)
Type: TC
Location: 24004 - 24753 (-)
Gene ID: HRGMv2_1923_6_26
Type:
Location: 25039 - 25587 (+)
Type:
Location: 25039 - 25587 (+)
Gene ID: HRGMv2_1923_6_27
Type: CAZyme
Location: 25705 - 26844 (+)
Type: CAZyme
Location: 25705 - 26844 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.