Cluster: HRGMv2_1923_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1923
- CGC Family ID: CGCFAM_00007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1923_6 | HRGMv2_1923_6_6 | 5168 | 5875 | + | GT26 |
| pfam | HRGMv2_1923_6 | HRGMv2_1923_6_7 | 5881 | 7116 | + | UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | HRGMv2_1923_6 | HRGMv2_1923_6_8 | 7113 | 9242 | + | GT4 | GT4 |
| NULL(UNKNOWN) | HRGMv2_1923_6 | HRGMv2_1923_6_9 | 9223 | 9600 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1923_6 | HRGMv2_1923_6_10 | 9610 | 10419 | + | 3.A.1.103.2 |
| TC | HRGMv2_1923_6 | HRGMv2_1923_6_11 | 10426 | 11187 | + | 3.A.1.103.4 |
Gene ID: HRGMv2_1923_6_6
Type: CAZyme
Location: 5168 - 5875 (+)
Type: CAZyme
Location: 5168 - 5875 (+)
Gene ID: HRGMv2_1923_6_7
Type: pfam
Location: 5881 - 7116 (+)
Type: pfam
Location: 5881 - 7116 (+)
Gene ID: HRGMv2_1923_6_8
Type: CAZyme
Location: 7113 - 9242 (+)
Type: CAZyme
Location: 7113 - 9242 (+)
Gene ID: HRGMv2_1923_6_9
Type:
Location: 9223 - 9600 (+)
Type:
Location: 9223 - 9600 (+)
Gene ID: HRGMv2_1923_6_10
Type: TC
Location: 9610 - 10419 (+)
Type: TC
Location: 9610 - 10419 (+)
Gene ID: HRGMv2_1923_6_11
Type: TC
Location: 10426 - 11187 (+)
Type: TC
Location: 10426 - 11187 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.