Cluster: HRGMv2_1923_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- CGC Family ID: CGCFAM_03719
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1923_5 | HRGMv2_1923_5_77 | 78212 | 79546 | + | GH4 |
| pfam | HRGMv2_1923_5 | HRGMv2_1923_5_78 | 79599 | 79922 | + | PTS_IIA |
| NULL(UNKNOWN) | HRGMv2_1923_5 | HRGMv2_1923_5_79 | 79924 | 80532 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1923_5 | HRGMv2_1923_5_80 | 80666 | 82009 | + | 2.A.66.1.32 |
| TC | HRGMv2_1923_5 | HRGMv2_1923_5_81 | 82162 | 83433 | + | 9.A.40.2.4 |
Gene ID: HRGMv2_1923_5_77
Type: CAZyme
Location: 78212 - 79546 (+)
Type: CAZyme
Location: 78212 - 79546 (+)
Gene ID: HRGMv2_1923_5_78
Type: pfam
Location: 79599 - 79922 (+)
Type: pfam
Location: 79599 - 79922 (+)
Gene ID: HRGMv2_1923_5_79
Type:
Location: 79924 - 80532 (+)
Type:
Location: 79924 - 80532 (+)
Gene ID: HRGMv2_1923_5_80
Type: TC
Location: 80666 - 82009 (+)
Type: TC
Location: 80666 - 82009 (+)
Gene ID: HRGMv2_1923_5_81
Type: TC
Location: 82162 - 83433 (+)
Type: TC
Location: 82162 - 83433 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.