Cluster: HRGMv2_1923_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- CGC Family ID: CGCFAM_09908
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1923_44 | HRGMv2_1923_44_1 | 85 | 840 | - | 3.A.1.34.1 |
| TC | HRGMv2_1923_44 | HRGMv2_1923_44_2 | 827 | 1705 | - | 3.A.1.34.1 |
| TC | HRGMv2_1923_44 | HRGMv2_1923_44_3 | 1712 | 2698 | - | 3.A.1.34.1 |
| NULL(UNKNOWN) | HRGMv2_1923_44 | HRGMv2_1923_44_4 | 2784 | 3029 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1923_44 | HRGMv2_1923_44_5 | 3200 | 4714 | - | IMPDH | FMN_dh |
| CAZyme | HRGMv2_1923_44 | HRGMv2_1923_44_6 | 4906 | 7032 | - | GH13_14 |
Gene ID: HRGMv2_1923_44_1
Type: TC
Location: 85 - 840 (-)
Type: TC
Location: 85 - 840 (-)
Gene ID: HRGMv2_1923_44_2
Type: TC
Location: 827 - 1705 (-)
Type: TC
Location: 827 - 1705 (-)
Gene ID: HRGMv2_1923_44_3
Type: TC
Location: 1712 - 2698 (-)
Type: TC
Location: 1712 - 2698 (-)
Gene ID: HRGMv2_1923_44_4
Type:
Location: 2784 - 3029 (-)
Type:
Location: 2784 - 3029 (-)
Gene ID: HRGMv2_1923_44_5
Type: pfam
Location: 3200 - 4714 (-)
Type: pfam
Location: 3200 - 4714 (-)
Gene ID: HRGMv2_1923_44_6
Type: CAZyme
Location: 4906 - 7032 (-)
Type: CAZyme
Location: 4906 - 7032 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.