Cluster: HRGMv2_1923_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_1923
- CGC Family ID: CGCFAM_00020
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1923_41 | HRGMv2_1923_41_5 | 3782 | 4768 | + | 9.B.157.1.1 |
| pfam | HRGMv2_1923_41 | HRGMv2_1923_41_6 | 4789 | 5871 | + | Glycos_transf_4 |
| pfam | HRGMv2_1923_41 | HRGMv2_1923_41_7 | 6088 | 6936 | + | PRD | PRD | CAT_RBD |
| TC | HRGMv2_1923_41 | HRGMv2_1923_41_8 | 7089 | 8942 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_1923_41 | HRGMv2_1923_41_9 | 8954 | 10381 | + | GH1 |
Gene ID: HRGMv2_1923_41_5
Type: TC
Location: 3782 - 4768 (+)
Type: TC
Location: 3782 - 4768 (+)
Gene ID: HRGMv2_1923_41_6
Type: pfam
Location: 4789 - 5871 (+)
Type: pfam
Location: 4789 - 5871 (+)
Gene ID: HRGMv2_1923_41_7
Type: pfam
Location: 6088 - 6936 (+)
Type: pfam
Location: 6088 - 6936 (+)
Gene ID: HRGMv2_1923_41_8
Type: TC
Location: 7089 - 8942 (+)
Type: TC
Location: 7089 - 8942 (+)
Gene ID: HRGMv2_1923_41_9
Type: CAZyme
Location: 8954 - 10381 (+)
Type: CAZyme
Location: 8954 - 10381 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.