Cluster: HRGMv2_1923_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1923_35 | HRGMv2_1923_35_15 | 15071 | 16525 | - | GH1 |
| TC | HRGMv2_1923_35 | HRGMv2_1923_35_16 | 16527 | 17888 | - | 4.A.1.2.11 |
| pfam | HRGMv2_1923_35 | HRGMv2_1923_35_17 | 18004 | 18834 | - | PRD | PRD | CAT_RBD |
| TC | HRGMv2_1923_35 | HRGMv2_1923_35_18 | 18850 | 19365 | - | 4.A.1.1.14 |
Gene ID: HRGMv2_1923_35_15
Type: CAZyme
Location: 15071 - 16525 (-)
Type: CAZyme
Location: 15071 - 16525 (-)
Gene ID: HRGMv2_1923_35_16
Type: TC
Location: 16527 - 17888 (-)
Type: TC
Location: 16527 - 17888 (-)
Gene ID: HRGMv2_1923_35_17
Type: pfam
Location: 18004 - 18834 (-)
Type: pfam
Location: 18004 - 18834 (-)
Gene ID: HRGMv2_1923_35_18
Type: TC
Location: 18850 - 19365 (-)
Type: TC
Location: 18850 - 19365 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.