Cluster: HRGMv2_1923_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1923_33 | HRGMv2_1923_33_7 | 9773 | 10969 | - | 2.A.37.2.2 |
| STP | HRGMv2_1923_33 | HRGMv2_1923_33_8 | 11245 | 12123 | - | HisKA |
| pfam | HRGMv2_1923_33 | HRGMv2_1923_33_9 | 12149 | 12934 | - | ABC2_membrane_4 |
| TC | HRGMv2_1923_33 | HRGMv2_1923_33_10 | 12927 | 13838 | - | 3.A.1.131.1 |
| TF | HRGMv2_1923_33 | HRGMv2_1923_33_11 | 13931 | 14602 | - | Trans_reg_C |
| NULL(UNKNOWN) | HRGMv2_1923_33 | HRGMv2_1923_33_12 | 14676 | 14819 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1923_33 | HRGMv2_1923_33_13 | 15352 | 20415 | + | GH36 |
Gene ID: HRGMv2_1923_33_7
Type: TC
Location: 9773 - 10969 (-)
Type: TC
Location: 9773 - 10969 (-)
Gene ID: HRGMv2_1923_33_8
Type: STP
Location: 11245 - 12123 (-)
Type: STP
Location: 11245 - 12123 (-)
Gene ID: HRGMv2_1923_33_9
Type: pfam
Location: 12149 - 12934 (-)
Type: pfam
Location: 12149 - 12934 (-)
Gene ID: HRGMv2_1923_33_10
Type: TC
Location: 12927 - 13838 (-)
Type: TC
Location: 12927 - 13838 (-)
Gene ID: HRGMv2_1923_33_11
Type: TF
Location: 13931 - 14602 (-)
Type: TF
Location: 13931 - 14602 (-)
Gene ID: HRGMv2_1923_33_12
Type:
Location: 14676 - 14819 (-)
Type:
Location: 14676 - 14819 (-)
Gene ID: HRGMv2_1923_33_13
Type: CAZyme
Location: 15352 - 20415 (+)
Type: CAZyme
Location: 15352 - 20415 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.