Cluster: HRGMv2_1923_CGC19
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1923_26 | HRGMv2_1923_26_4 | 3724 | 6117 | - | GT4 |
| pfam | HRGMv2_1923_26 | HRGMv2_1923_26_5 | 6114 | 7352 | - | Glyphos_transf |
| pfam | HRGMv2_1923_26 | HRGMv2_1923_26_6 | 7392 | 7778 | - | CTP_transf_like |
| TC | HRGMv2_1923_26 | HRGMv2_1923_26_7 | 7805 | 8626 | - | 3.A.1.104.2 |
| TC | HRGMv2_1923_26 | HRGMv2_1923_26_8 | 8642 | 9448 | - | 3.A.1.104.1 |
| TC | HRGMv2_1923_26 | HRGMv2_1923_26_9 | 9784 | 10833 | - | 9.B.97.1.2 |
| pfam | HRGMv2_1923_26 | HRGMv2_1923_26_10 | 10926 | 12029 | - | MMR_HSR1 | FeoB_N | YchF-GTPase_C |
| pfam | HRGMv2_1923_26 | HRGMv2_1923_26_11 | 12162 | 13322 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | HRGMv2_1923_26 | HRGMv2_1923_26_12 | 13362 | 14759 | - | 2.A.66.1.32 |
| NULL(UNKNOWN) | HRGMv2_1923_26 | HRGMv2_1923_26_13 | 14930 | 15550 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1923_26 | HRGMv2_1923_26_14 | 15596 | 16243 | - | PhoU | PhoU |
| TC | HRGMv2_1923_26 | HRGMv2_1923_26_15 | 16258 | 17016 | - | 3.A.1.7.5 |
| TC | HRGMv2_1923_26 | HRGMv2_1923_26_16 | 17027 | 18268 | - | 3.A.1.7.5 |
| TC | HRGMv2_1923_26 | HRGMv2_1923_26_17 | 18265 | 19206 | - | 3.A.1.7.5 |
Gene ID: HRGMv2_1923_26_4
Type: CAZyme
Location: 3724 - 6117 (-)
Type: CAZyme
Location: 3724 - 6117 (-)
Gene ID: HRGMv2_1923_26_5
Type: pfam
Location: 6114 - 7352 (-)
Type: pfam
Location: 6114 - 7352 (-)
Gene ID: HRGMv2_1923_26_6
Type: pfam
Location: 7392 - 7778 (-)
Type: pfam
Location: 7392 - 7778 (-)
Gene ID: HRGMv2_1923_26_7
Type: TC
Location: 7805 - 8626 (-)
Type: TC
Location: 7805 - 8626 (-)
Gene ID: HRGMv2_1923_26_8
Type: TC
Location: 8642 - 9448 (-)
Type: TC
Location: 8642 - 9448 (-)
Gene ID: HRGMv2_1923_26_9
Type: TC
Location: 9784 - 10833 (-)
Type: TC
Location: 9784 - 10833 (-)
Gene ID: HRGMv2_1923_26_10
Type: pfam
Location: 10926 - 12029 (-)
Type: pfam
Location: 10926 - 12029 (-)
Gene ID: HRGMv2_1923_26_11
Type: pfam
Location: 12162 - 13322 (-)
Type: pfam
Location: 12162 - 13322 (-)
Gene ID: HRGMv2_1923_26_12
Type: TC
Location: 13362 - 14759 (-)
Type: TC
Location: 13362 - 14759 (-)
Gene ID: HRGMv2_1923_26_13
Type:
Location: 14930 - 15550 (-)
Type:
Location: 14930 - 15550 (-)
Gene ID: HRGMv2_1923_26_14
Type: pfam
Location: 15596 - 16243 (-)
Type: pfam
Location: 15596 - 16243 (-)
Gene ID: HRGMv2_1923_26_15
Type: TC
Location: 16258 - 17016 (-)
Type: TC
Location: 16258 - 17016 (-)
Gene ID: HRGMv2_1923_26_16
Type: TC
Location: 17027 - 18268 (-)
Type: TC
Location: 17027 - 18268 (-)
Gene ID: HRGMv2_1923_26_17
Type: TC
Location: 18265 - 19206 (-)
Type: TC
Location: 18265 - 19206 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.