Cluster: HRGMv2_1923_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- CGC Family ID: CGCFAM_02497
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1923_24 | HRGMv2_1923_24_8 | 5834 | 7186 | + | 2.A.66.1.45 |
| CAZyme | HRGMv2_1923_24 | HRGMv2_1923_24_9 | 7362 | 9245 | - | GT2 |
| TC | HRGMv2_1923_24 | HRGMv2_1923_24_10 | 9247 | 11160 | - | 9.B.34.1.2 |
| STP | HRGMv2_1923_24 | HRGMv2_1923_24_11 | 11215 | 13455 | - | EAL | GGDEF | dCache_1 |
| NULL(UNKNOWN) | HRGMv2_1923_24 | HRGMv2_1923_24_12 | 13596 | 14012 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1923_24 | HRGMv2_1923_24_13 | 14054 | 14695 | - | 3.A.1.125.2 |
Gene ID: HRGMv2_1923_24_8
Type: TC
Location: 5834 - 7186 (+)
Type: TC
Location: 5834 - 7186 (+)
Gene ID: HRGMv2_1923_24_9
Type: CAZyme
Location: 7362 - 9245 (-)
Type: CAZyme
Location: 7362 - 9245 (-)
Gene ID: HRGMv2_1923_24_10
Type: TC
Location: 9247 - 11160 (-)
Type: TC
Location: 9247 - 11160 (-)
Gene ID: HRGMv2_1923_24_11
Type: STP
Location: 11215 - 13455 (-)
Type: STP
Location: 11215 - 13455 (-)
Gene ID: HRGMv2_1923_24_12
Type:
Location: 13596 - 14012 (-)
Type:
Location: 13596 - 14012 (-)
Gene ID: HRGMv2_1923_24_13
Type: TC
Location: 14054 - 14695 (-)
Type: TC
Location: 14054 - 14695 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.