Cluster: HRGMv2_1923_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1923_18 | HRGMv2_1923_18_28 | 33903 | 35195 | - | 4.A.7.1.2 |
| pfam | HRGMv2_1923_18 | HRGMv2_1923_18_29 | 35228 | 35506 | - | PTS_IIB |
| TC | HRGMv2_1923_18 | HRGMv2_1923_18_30 | 35526 | 35966 | - | 4.A.7.1.2 |
| pfam | HRGMv2_1923_18 | HRGMv2_1923_18_31 | 36468 | 37115 | - | IspD | NTP_transf_3 |
| CAZyme | HRGMv2_1923_18 | HRGMv2_1923_18_32 | 37250 | 39670 | - | GT35 |
Gene ID: HRGMv2_1923_18_28
Type: TC
Location: 33903 - 35195 (-)
Type: TC
Location: 33903 - 35195 (-)
Gene ID: HRGMv2_1923_18_29
Type: pfam
Location: 35228 - 35506 (-)
Type: pfam
Location: 35228 - 35506 (-)
Gene ID: HRGMv2_1923_18_30
Type: TC
Location: 35526 - 35966 (-)
Type: TC
Location: 35526 - 35966 (-)
Gene ID: HRGMv2_1923_18_31
Type: pfam
Location: 36468 - 37115 (-)
Type: pfam
Location: 36468 - 37115 (-)
Gene ID: HRGMv2_1923_18_32
Type: CAZyme
Location: 37250 - 39670 (-)
Type: CAZyme
Location: 37250 - 39670 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.