Cluster: HRGMv2_1923_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: beta-mannan/fructan
- Genome ID: HRGMv2_1923
- CGC Family ID: CGCFAM_00094
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1923_17 | HRGMv2_1923_17_23 | 22655 | 24496 | - | 3.A.16.1.2 |
| peptidase | HRGMv2_1923_17 | HRGMv2_1923_17_24 | 24649 | 26475 | - | C44.UPW |
| TF | HRGMv2_1923_17 | HRGMv2_1923_17_25 | 26674 | 27660 | + | LacI |
| TC | HRGMv2_1923_17 | HRGMv2_1923_17_26 | 27882 | 29786 | + | 4.A.1.2.12 |
| CAZyme | HRGMv2_1923_17 | HRGMv2_1923_17_27 | 29788 | 31236 | + | GH32 |
| STP | HRGMv2_1923_17 | HRGMv2_1923_17_28 | 31249 | 32235 | + | PfkB |
| TC | HRGMv2_1923_17 | HRGMv2_1923_17_29 | 32338 | 33309 | - | 9.B.157.1.1 |
Gene ID: HRGMv2_1923_17_23
Type: TC
Location: 22655 - 24496 (-)
Type: TC
Location: 22655 - 24496 (-)
Gene ID: HRGMv2_1923_17_24
Type: peptidase
Location: 24649 - 26475 (-)
Type: peptidase
Location: 24649 - 26475 (-)
Gene ID: HRGMv2_1923_17_25
Type: TF
Location: 26674 - 27660 (+)
Type: TF
Location: 26674 - 27660 (+)
Gene ID: HRGMv2_1923_17_26
Type: TC
Location: 27882 - 29786 (+)
Type: TC
Location: 27882 - 29786 (+)
Gene ID: HRGMv2_1923_17_27
Type: CAZyme
Location: 29788 - 31236 (+)
Type: CAZyme
Location: 29788 - 31236 (+)
Gene ID: HRGMv2_1923_17_28
Type: STP
Location: 31249 - 32235 (+)
Type: STP
Location: 31249 - 32235 (+)
Gene ID: HRGMv2_1923_17_29
Type: TC
Location: 32338 - 33309 (-)
Type: TC
Location: 32338 - 33309 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.