Cluster: HRGMv2_1923_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1923_10 | HRGMv2_1923_10_69 | 65852 | 66853 | + | GT4 |
| STP | HRGMv2_1923_10 | HRGMv2_1923_10_70 | 66909 | 68276 | - | HD |
| pfam | HRGMv2_1923_10 | HRGMv2_1923_10_71 | 68327 | 68908 | + | rRNA_methylase |
| TC | HRGMv2_1923_10 | HRGMv2_1923_10_72 | 69472 | 72030 | + | 3.A.9.1.2 |
| TC | HRGMv2_1923_10 | HRGMv2_1923_10_73 | 72152 | 72379 | + | 9.A.8.1.6 |
| TC | HRGMv2_1923_10 | HRGMv2_1923_10_74 | 72376 | 74388 | + | 9.A.8.1.6 |
Gene ID: HRGMv2_1923_10_69
Type: CAZyme
Location: 65852 - 66853 (+)
Type: CAZyme
Location: 65852 - 66853 (+)
Gene ID: HRGMv2_1923_10_70
Type: STP
Location: 66909 - 68276 (-)
Type: STP
Location: 66909 - 68276 (-)
Gene ID: HRGMv2_1923_10_71
Type: pfam
Location: 68327 - 68908 (+)
Type: pfam
Location: 68327 - 68908 (+)
Gene ID: HRGMv2_1923_10_72
Type: TC
Location: 69472 - 72030 (+)
Type: TC
Location: 69472 - 72030 (+)
Gene ID: HRGMv2_1923_10_73
Type: TC
Location: 72152 - 72379 (+)
Type: TC
Location: 72152 - 72379 (+)
Gene ID: HRGMv2_1923_10_74
Type: TC
Location: 72376 - 74388 (+)
Type: TC
Location: 72376 - 74388 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.