Cluster: HRGMv2_1923_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1923
- CGC Family ID: CGCFAM_01833
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1923_10 | HRGMv2_1923_10_10 | 8139 | 9230 | - | 2.A.103.1.3 |
| CAZyme | HRGMv2_1923_10 | HRGMv2_1923_10_11 | 9532 | 13548 | + | GH123 |
| TF | HRGMv2_1923_10 | HRGMv2_1923_10_12 | 13894 | 14106 | + | HTH_3 |
| CAZyme | HRGMv2_1923_10 | HRGMv2_1923_10_13 | 14394 | 15488 | + | GT28 |
Gene ID: HRGMv2_1923_10_10
Type: TC
Location: 8139 - 9230 (-)
Type: TC
Location: 8139 - 9230 (-)
Gene ID: HRGMv2_1923_10_11
Type: CAZyme
Location: 9532 - 13548 (+)
Type: CAZyme
Location: 9532 - 13548 (+)
Gene ID: HRGMv2_1923_10_12
Type: TF
Location: 13894 - 14106 (+)
Type: TF
Location: 13894 - 14106 (+)
Gene ID: HRGMv2_1923_10_13
Type: CAZyme
Location: 14394 - 15488 (+)
Type: CAZyme
Location: 14394 - 15488 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.