Cluster: HRGMv2_1923_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1923
- CGC Family ID: CGCFAM_00187
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1923_9 | HRGMv2_1923_9_2 | 626 | 2371 | + | 3.A.1.135.5 |
| TC | HRGMv2_1923_9 | HRGMv2_1923_9_3 | 2364 | 4232 | + | 3.A.1.135.5 |
| CAZyme | HRGMv2_1923_9 | HRGMv2_1923_9_4 | 4400 | 6223 | + | CBM48 | GH13_9 |
Gene ID: HRGMv2_1923_9_2
Type: TC
Location: 626 - 2371 (+)
Type: TC
Location: 626 - 2371 (+)
Gene ID: HRGMv2_1923_9_3
Type: TC
Location: 2364 - 4232 (+)
Type: TC
Location: 2364 - 4232 (+)
Gene ID: HRGMv2_1923_9_4
Type: CAZyme
Location: 4400 - 6223 (+)
Type: CAZyme
Location: 4400 - 6223 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter sp900759455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.