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Cluster: HRGMv2_1917_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1917_4 HRGMv2_1917_4_52 45338 46138 - 8.A.5.1.4
STP HRGMv2_1917_4 HRGMv2_1917_4_53 46312 47574 + Aminotran_1_2
TC HRGMv2_1917_4 HRGMv2_1917_4_54 47618 48715 - 2.A.86.1.8
TC HRGMv2_1917_4 HRGMv2_1917_4_55 48822 49424 - 9.B.105.2.1
pfam HRGMv2_1917_4 HRGMv2_1917_4_56 49396 49938 - Hexapep
CAZyme HRGMv2_1917_4 HRGMv2_1917_4_57 50256 51248 - GT2
NULL(UNKNOWN) HRGMv2_1917_4 HRGMv2_1917_4_58 51367 51660 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1917_4 HRGMv2_1917_4_59 51692 52222 - 3.A.7.19.1
pfam HRGMv2_1917_4 HRGMv2_1917_4_60 52215 52805 - RNase_H | Cauli_VI
NULL(UNKNOWN) HRGMv2_1917_4 HRGMv2_1917_4_61 52969 53604 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1917_4 HRGMv2_1917_4_62 53675 54634 - 3.A.1.5.20
TC HRGMv2_1917_4 HRGMv2_1917_4_63 54634 55632 - 3.A.1.5.2
TC HRGMv2_1917_4 HRGMv2_1917_4_64 55637 56605 - 3.A.1.5.2
TC HRGMv2_1917_4 HRGMv2_1917_4_65 56605 57549 - 3.A.1.5.2
TC HRGMv2_1917_4 HRGMv2_1917_4_66 57651 59360 - 3.A.1.5.25
peptidase HRGMv2_1917_4 HRGMv2_1917_4_67 59739 60947 + M20.UPB
pfam HRGMv2_1917_4 HRGMv2_1917_4_68 60952 61848 + DAGK_cat | NAD_kinase | YegS_C
TC HRGMv2_1917_4 HRGMv2_1917_4_69 62047 62979 - 3.A.1.5.19
TC HRGMv2_1917_4 HRGMv2_1917_4_70 62981 64075 - 3.A.1.5.19
TC HRGMv2_1917_4 HRGMv2_1917_4_71 64075 65004 - 3.A.1.5.19
TC HRGMv2_1917_4 HRGMv2_1917_4_72 65011 65952 - 3.A.1.5.19
TC HRGMv2_1917_4 HRGMv2_1917_4_73 66037 67632 - 3.A.1.5.2
CAZyme HRGMv2_1917_4 HRGMv2_1917_4_74 67882 69180 + GH32
Gene ID: HRGMv2_1917_4_52
Type: TC
Location: 45338 - 46138 (-)
Gene ID: HRGMv2_1917_4_53
Type: STP
Location: 46312 - 47574 (+)
Gene ID: HRGMv2_1917_4_54
Type: TC
Location: 47618 - 48715 (-)
Gene ID: HRGMv2_1917_4_55
Type: TC
Location: 48822 - 49424 (-)
Gene ID: HRGMv2_1917_4_56
Type: pfam
Location: 49396 - 49938 (-)
Gene ID: HRGMv2_1917_4_57
Type: CAZyme
Location: 50256 - 51248 (-)
Gene ID: HRGMv2_1917_4_58
Type:
Location: 51367 - 51660 (+)
Gene ID: HRGMv2_1917_4_59
Type: TC
Location: 51692 - 52222 (-)
Gene ID: HRGMv2_1917_4_60
Type: pfam
Location: 52215 - 52805 (-)
Gene ID: HRGMv2_1917_4_61
Type:
Location: 52969 - 53604 (+)
Gene ID: HRGMv2_1917_4_62
Type: TC
Location: 53675 - 54634 (-)
Gene ID: HRGMv2_1917_4_63
Type: TC
Location: 54634 - 55632 (-)
Gene ID: HRGMv2_1917_4_64
Type: TC
Location: 55637 - 56605 (-)
Gene ID: HRGMv2_1917_4_65
Type: TC
Location: 56605 - 57549 (-)
Gene ID: HRGMv2_1917_4_66
Type: TC
Location: 57651 - 59360 (-)
Gene ID: HRGMv2_1917_4_67
Type: peptidase
Location: 59739 - 60947 (+)
Gene ID: HRGMv2_1917_4_68
Type: pfam
Location: 60952 - 61848 (+)
Gene ID: HRGMv2_1917_4_69
Type: TC
Location: 62047 - 62979 (-)
Gene ID: HRGMv2_1917_4_70
Type: TC
Location: 62981 - 64075 (-)
Gene ID: HRGMv2_1917_4_71
Type: TC
Location: 64075 - 65004 (-)
Gene ID: HRGMv2_1917_4_72
Type: TC
Location: 65011 - 65952 (-)
Gene ID: HRGMv2_1917_4_73
Type: TC
Location: 66037 - 67632 (-)
Gene ID: HRGMv2_1917_4_74
Type: CAZyme
Location: 67882 - 69180 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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