Cluster: HRGMv2_1917_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1917
- CGC Family ID: CGCFAM_00030
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1917_4 | HRGMv2_1917_4_41 | 38233 | 39246 | + | 9.B.97.1.3 |
| NULL(UNKNOWN) | HRGMv2_1917_4 | HRGMv2_1917_4_42 | 39849 | 40025 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1917_4 | HRGMv2_1917_4_43 | 40172 | 40966 | - | GH78 |
| CAZyme | HRGMv2_1917_4 | HRGMv2_1917_4_44 | 41039 | 42493 | - | CBM67 | GH78 |
Gene ID: HRGMv2_1917_4_41
Type: TC
Location: 38233 - 39246 (+)
Type: TC
Location: 38233 - 39246 (+)
Gene ID: HRGMv2_1917_4_42
Type:
Location: 39849 - 40025 (-)
Type:
Location: 39849 - 40025 (-)
Gene ID: HRGMv2_1917_4_43
Type: CAZyme
Location: 40172 - 40966 (-)
Type: CAZyme
Location: 40172 - 40966 (-)
Gene ID: HRGMv2_1917_4_44
Type: CAZyme
Location: 41039 - 42493 (-)
Type: CAZyme
Location: 41039 - 42493 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.