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Cluster: HRGMv2_1917_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1917_2 HRGMv2_1917_2_71 79683 80501 + 2.A.119.2.1
pfam HRGMv2_1917_2 HRGMv2_1917_2_72 80603 81568 + Ldh_1_N | Ldh_1_C
pfam HRGMv2_1917_2 HRGMv2_1917_2_73 81595 82407 + Amidase_3
CAZyme HRGMv2_1917_2 HRGMv2_1917_2_74 82526 83953 - GH1
pfam HRGMv2_1917_2 HRGMv2_1917_2_75 83955 84641 - DUF6198
TF HRGMv2_1917_2 HRGMv2_1917_2_76 84710 85450 - HTH_6
TC HRGMv2_1917_2 HRGMv2_1917_2_77 85803 87278 + 9.B.174.1.1
Gene ID: HRGMv2_1917_2_71
Type: TC
Location: 79683 - 80501 (+)
Gene ID: HRGMv2_1917_2_72
Type: pfam
Location: 80603 - 81568 (+)
Gene ID: HRGMv2_1917_2_73
Type: pfam
Location: 81595 - 82407 (+)
Gene ID: HRGMv2_1917_2_74
Type: CAZyme
Location: 82526 - 83953 (-)
Gene ID: HRGMv2_1917_2_75
Type: pfam
Location: 83955 - 84641 (-)
Gene ID: HRGMv2_1917_2_76
Type: TF
Location: 84710 - 85450 (-)
Gene ID: HRGMv2_1917_2_77
Type: TC
Location: 85803 - 87278 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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