Cluster: HRGMv2_1917_CGC40
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1917
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1917_33 | HRGMv2_1917_33_14 | 13342 | 14688 | - | 2.A.66.1.13 |
| pfam | HRGMv2_1917_33 | HRGMv2_1917_33_15 | 15244 | 15921 | + | DUF969 |
| TC | HRGMv2_1917_33 | HRGMv2_1917_33_16 | 15921 | 16940 | + | 9.B.211.1.2 |
| peptidase | HRGMv2_1917_33 | HRGMv2_1917_33_17 | 16953 | 17594 | + | C15.001 |
| pfam | HRGMv2_1917_33 | HRGMv2_1917_33_18 | 17594 | 18016 | + | GGACT |
| CAZyme | HRGMv2_1917_33 | HRGMv2_1917_33_19 | 18233 | 24463 | - | GH84 |
Gene ID: HRGMv2_1917_33_14
Type: TC
Location: 13342 - 14688 (-)
Type: TC
Location: 13342 - 14688 (-)
Gene ID: HRGMv2_1917_33_15
Type: pfam
Location: 15244 - 15921 (+)
Type: pfam
Location: 15244 - 15921 (+)
Gene ID: HRGMv2_1917_33_16
Type: TC
Location: 15921 - 16940 (+)
Type: TC
Location: 15921 - 16940 (+)
Gene ID: HRGMv2_1917_33_17
Type: peptidase
Location: 16953 - 17594 (+)
Type: peptidase
Location: 16953 - 17594 (+)
Gene ID: HRGMv2_1917_33_18
Type: pfam
Location: 17594 - 18016 (+)
Type: pfam
Location: 17594 - 18016 (+)
Gene ID: HRGMv2_1917_33_19
Type: CAZyme
Location: 18233 - 24463 (-)
Type: CAZyme
Location: 18233 - 24463 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.