dbCAN Logo

Cluster: HRGMv2_1917_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1917_2 HRGMv2_1917_2_25 36692 38056 + 9.B.18.1.2
CAZyme HRGMv2_1917_2 HRGMv2_1917_2_26 38084 38953 + GT14
CAZyme HRGMv2_1917_2 HRGMv2_1917_2_27 38971 39894 + GT2
CAZyme HRGMv2_1917_2 HRGMv2_1917_2_28 39924 40859 + GT2
pfam HRGMv2_1917_2 HRGMv2_1917_2_29 40870 42138 + Polysacc_synt
pfam HRGMv2_1917_2 HRGMv2_1917_2_30 42143 44122 + DUF6077
CAZyme HRGMv2_1917_2 HRGMv2_1917_2_31 44182 44853 + GT2
Gene ID: HRGMv2_1917_2_25
Type: TC
Location: 36692 - 38056 (+)
Gene ID: HRGMv2_1917_2_26
Type: CAZyme
Location: 38084 - 38953 (+)
Gene ID: HRGMv2_1917_2_27
Type: CAZyme
Location: 38971 - 39894 (+)
Gene ID: HRGMv2_1917_2_28
Type: CAZyme
Location: 39924 - 40859 (+)
Gene ID: HRGMv2_1917_2_29
Type: pfam
Location: 40870 - 42138 (+)
Gene ID: HRGMv2_1917_2_30
Type: pfam
Location: 42143 - 44122 (+)
Gene ID: HRGMv2_1917_2_31
Type: CAZyme
Location: 44182 - 44853 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List