Cluster: HRGMv2_1917_CGC34
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1917
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1917_24 | HRGMv2_1917_24_27 | 30248 | 31411 | + | GT4 |
| pfam | HRGMv2_1917_24 | HRGMv2_1917_24_28 | 31451 | 32617 | + | UDPG_MGDP_dh | NAD_Gly3P_dh_N | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | HRGMv2_1917_24 | HRGMv2_1917_24_29 | 32620 | 34029 | + | 2.A.66.2.16 |
Gene ID: HRGMv2_1917_24_27
Type: CAZyme
Location: 30248 - 31411 (+)
Type: CAZyme
Location: 30248 - 31411 (+)
Gene ID: HRGMv2_1917_24_28
Type: pfam
Location: 31451 - 32617 (+)
Type: pfam
Location: 31451 - 32617 (+)
Gene ID: HRGMv2_1917_24_29
Type: TC
Location: 32620 - 34029 (+)
Type: TC
Location: 32620 - 34029 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.