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Cluster: HRGMv2_1917_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1917_23 HRGMv2_1917_23_2 1281 1883 + 9.B.18.1.2
pfam HRGMv2_1917_23 HRGMv2_1917_23_3 1846 2532 + PglD_N
CAZyme HRGMv2_1917_23 HRGMv2_1917_23_4 2546 3691 + GT4
CAZyme HRGMv2_1917_23 HRGMv2_1917_23_5 3678 4802 + GT4
pfam HRGMv2_1917_23 HRGMv2_1917_23_6 4807 5907 + Epimerase_2
CAZyme HRGMv2_1917_23 HRGMv2_1917_23_7 5914 7071 + GT4
CAZyme HRGMv2_1917_23 HRGMv2_1917_23_8 7065 9299 + GT2
Gene ID: HRGMv2_1917_23_2
Type: TC
Location: 1281 - 1883 (+)
Gene ID: HRGMv2_1917_23_3
Type: pfam
Location: 1846 - 2532 (+)
Gene ID: HRGMv2_1917_23_4
Type: CAZyme
Location: 2546 - 3691 (+)
Gene ID: HRGMv2_1917_23_5
Type: CAZyme
Location: 3678 - 4802 (+)
Gene ID: HRGMv2_1917_23_6
Type: pfam
Location: 4807 - 5907 (+)
Gene ID: HRGMv2_1917_23_7
Type: CAZyme
Location: 5914 - 7071 (+)
Gene ID: HRGMv2_1917_23_8
Type: CAZyme
Location: 7065 - 9299 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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