Cluster: HRGMv2_1917_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1917
- CGC Family ID: CGCFAM_05330
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1917_2 | HRGMv2_1917_2_19 | 24152 | 25006 | + | 2.A.115.1.1 |
| CAZyme | HRGMv2_1917_2 | HRGMv2_1917_2_20 | 25124 | 28591 | + | GH25 |
| CAZyme | HRGMv2_1917_2 | HRGMv2_1917_2_21 | 28813 | 32478 | + | GH73 |
Gene ID: HRGMv2_1917_2_19
Type: TC
Location: 24152 - 25006 (+)
Type: TC
Location: 24152 - 25006 (+)
Gene ID: HRGMv2_1917_2_20
Type: CAZyme
Location: 25124 - 28591 (+)
Type: CAZyme
Location: 25124 - 28591 (+)
Gene ID: HRGMv2_1917_2_21
Type: CAZyme
Location: 28813 - 32478 (+)
Type: CAZyme
Location: 28813 - 32478 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.