Cluster: HRGMv2_1917_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1917
- CGC Family ID: CGCFAM_01833
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1917_15 | HRGMv2_1917_15_45 | 41505 | 47045 | + | CBM32 | CBM32 | CBM32 | CBM32 | CBM32 | PL8 |
| TC | HRGMv2_1917_15 | HRGMv2_1917_15_46 | 47210 | 48286 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_1917_15 | HRGMv2_1917_15_47 | 48314 | 49390 | + | GT28 |
Gene ID: HRGMv2_1917_15_45
Type: CAZyme
Location: 41505 - 47045 (+)
Type: CAZyme
Location: 41505 - 47045 (+)
Gene ID: HRGMv2_1917_15_46
Type: TC
Location: 47210 - 48286 (+)
Type: TC
Location: 47210 - 48286 (+)
Gene ID: HRGMv2_1917_15_47
Type: CAZyme
Location: 48314 - 49390 (+)
Type: CAZyme
Location: 48314 - 49390 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.