Cluster: HRGMv2_1917_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1917
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1917_10 | HRGMv2_1917_10_72 | 66705 | 67010 | + | 4.A.3.2.3 |
| pfam | HRGMv2_1917_10 | HRGMv2_1917_10_73 | 67099 | 68010 | + | Mem_trans |
| CAZyme | HRGMv2_1917_10 | HRGMv2_1917_10_74 | 68395 | 70992 | + | CE8 |
Gene ID: HRGMv2_1917_10_72
Type: TC
Location: 66705 - 67010 (+)
Type: TC
Location: 66705 - 67010 (+)
Gene ID: HRGMv2_1917_10_73
Type: pfam
Location: 67099 - 68010 (+)
Type: pfam
Location: 67099 - 68010 (+)
Gene ID: HRGMv2_1917_10_74
Type: CAZyme
Location: 68395 - 70992 (+)
Type: CAZyme
Location: 68395 - 70992 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.