Cluster: HRGMv2_1917_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1917
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1917_9 | HRGMv2_1917_9_31 | 30683 | 31603 | + | 8.A.5.1.6 |
| TF | HRGMv2_1917_9 | HRGMv2_1917_9_32 | 31711 | 32463 | + | HTH_6 |
| TC | HRGMv2_1917_9 | HRGMv2_1917_9_33 | 32578 | 34392 | + | 4.A.1.2.6 |
| pfam | HRGMv2_1917_9 | HRGMv2_1917_9_34 | 34414 | 35133 | + | adh_short | 3Beta_HSD | Epimerase | KR | adh_short_C2 |
| pfam | HRGMv2_1917_9 | HRGMv2_1917_9_35 | 35194 | 35841 | + | NAD_binding_10 |
| CAZyme | HRGMv2_1917_9 | HRGMv2_1917_9_36 | 35844 | 37265 | + | GH1 |
| TC | HRGMv2_1917_9 | HRGMv2_1917_9_37 | 37268 | 38659 | + | 2.A.1.3.30 |
Gene ID: HRGMv2_1917_9_31
Type: TC
Location: 30683 - 31603 (+)
Type: TC
Location: 30683 - 31603 (+)
Gene ID: HRGMv2_1917_9_32
Type: TF
Location: 31711 - 32463 (+)
Type: TF
Location: 31711 - 32463 (+)
Gene ID: HRGMv2_1917_9_33
Type: TC
Location: 32578 - 34392 (+)
Type: TC
Location: 32578 - 34392 (+)
Gene ID: HRGMv2_1917_9_34
Type: pfam
Location: 34414 - 35133 (+)
Type: pfam
Location: 34414 - 35133 (+)
Gene ID: HRGMv2_1917_9_35
Type: pfam
Location: 35194 - 35841 (+)
Type: pfam
Location: 35194 - 35841 (+)
Gene ID: HRGMv2_1917_9_36
Type: CAZyme
Location: 35844 - 37265 (+)
Type: CAZyme
Location: 35844 - 37265 (+)
Gene ID: HRGMv2_1917_9_37
Type: TC
Location: 37268 - 38659 (+)
Type: TC
Location: 37268 - 38659 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.