Cluster: HRGMv2_1917_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1917
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1917_6 | HRGMv2_1917_6_13 | 11003 | 12268 | + | GH125 |
| TC | HRGMv2_1917_6 | HRGMv2_1917_6_14 | 12423 | 13763 | + | 4.A.3.2.8 |
| CAZyme | HRGMv2_1917_6 | HRGMv2_1917_6_15 | 13747 | 16401 | + | GH38 |
| TF | HRGMv2_1917_6 | HRGMv2_1917_6_16 | 16445 | 17206 | + | HTH_6 |
| CAZyme | HRGMv2_1917_6 | HRGMv2_1917_6_17 | 17225 | 19435 | + | GH3 |
Gene ID: HRGMv2_1917_6_13
Type: CAZyme
Location: 11003 - 12268 (+)
Type: CAZyme
Location: 11003 - 12268 (+)
Gene ID: HRGMv2_1917_6_14
Type: TC
Location: 12423 - 13763 (+)
Type: TC
Location: 12423 - 13763 (+)
Gene ID: HRGMv2_1917_6_15
Type: CAZyme
Location: 13747 - 16401 (+)
Type: CAZyme
Location: 13747 - 16401 (+)
Gene ID: HRGMv2_1917_6_16
Type: TF
Location: 16445 - 17206 (+)
Type: TF
Location: 16445 - 17206 (+)
Gene ID: HRGMv2_1917_6_17
Type: CAZyme
Location: 17225 - 19435 (+)
Type: CAZyme
Location: 17225 - 19435 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.