Cluster: HRGMv2_1917_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1917
- CGC Family ID: CGCFAM_01864
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1917_1 | HRGMv2_1917_1_40 | 48959 | 51439 | + | 3.A.3.6.10 |
| pfam | HRGMv2_1917_1 | HRGMv2_1917_1_41 | 51617 | 52258 | + | LUD_dom |
| CAZyme | HRGMv2_1917_1 | HRGMv2_1917_1_42 | 52260 | 53669 | + | GH77 |
Gene ID: HRGMv2_1917_1_40
Type: TC
Location: 48959 - 51439 (+)
Type: TC
Location: 48959 - 51439 (+)
Gene ID: HRGMv2_1917_1_41
Type: pfam
Location: 51617 - 52258 (+)
Type: pfam
Location: 51617 - 52258 (+)
Gene ID: HRGMv2_1917_1_42
Type: CAZyme
Location: 52260 - 53669 (+)
Type: CAZyme
Location: 52260 - 53669 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.