dbCAN Logo

Cluster: HRGMv2_1915_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1915_38 HRGMv2_1915_38_1 3 1919 - GT2 | GT2
TC HRGMv2_1915_38 HRGMv2_1915_38_2 2011 2784 - 3.A.1.103.4
TC HRGMv2_1915_38 HRGMv2_1915_38_3 2789 3934 - 3.A.1.103.4
TC HRGMv2_1915_38 HRGMv2_1915_38_4 4430 5827 + 9.B.18.1.3
CAZyme HRGMv2_1915_38 HRGMv2_1915_38_5 5824 6648 + GT2
CAZyme HRGMv2_1915_38 HRGMv2_1915_38_6 6645 7580 + GT2
NULL(UNKNOWN) HRGMv2_1915_38 HRGMv2_1915_38_7 7658 7990 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1915_38 HRGMv2_1915_38_8 8102 9916 - 3.A.1.106.2
TC HRGMv2_1915_38 HRGMv2_1915_38_9 9927 11735 - 3.A.1.106.14
Gene ID: HRGMv2_1915_38_1
Type: CAZyme
Location: 3 - 1919 (-)
Gene ID: HRGMv2_1915_38_2
Type: TC
Location: 2011 - 2784 (-)
Gene ID: HRGMv2_1915_38_3
Type: TC
Location: 2789 - 3934 (-)
Gene ID: HRGMv2_1915_38_4
Type: TC
Location: 4430 - 5827 (+)
Gene ID: HRGMv2_1915_38_5
Type: CAZyme
Location: 5824 - 6648 (+)
Gene ID: HRGMv2_1915_38_6
Type: CAZyme
Location: 6645 - 7580 (+)
Gene ID: HRGMv2_1915_38_7
Type:
Location: 7658 - 7990 (-)
Gene ID: HRGMv2_1915_38_8
Type: TC
Location: 8102 - 9916 (-)
Gene ID: HRGMv2_1915_38_9
Type: TC
Location: 9927 - 11735 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List