Cluster: HRGMv2_1915_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1915
- CGC Family ID: CGCFAM_09903
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1915_3 | HRGMv2_1915_3_6 | 5495 | 6649 | - | CE9 |
| STP | HRGMv2_1915_3 | HRGMv2_1915_3_7 | 6829 | 8004 | + | SIS | SIS |
| TC | HRGMv2_1915_3 | HRGMv2_1915_3_8 | 8016 | 8456 | + | 4.A.6.1.14 |
| TF | HRGMv2_1915_3 | HRGMv2_1915_3_9 | 8485 | 9264 | - | HTH_6 |
| CAZyme | HRGMv2_1915_3 | HRGMv2_1915_3_10 | 9261 | 10220 | - | CE2 |
| CAZyme | HRGMv2_1915_3 | HRGMv2_1915_3_11 | 10338 | 12149 | + | GH20 |
| TC | HRGMv2_1915_3 | HRGMv2_1915_3_12 | 12189 | 13445 | + | 3.A.1.1.40 |
| TC | HRGMv2_1915_3 | HRGMv2_1915_3_13 | 13511 | 14416 | + | 3.A.1.1.20 |
| TC | HRGMv2_1915_3 | HRGMv2_1915_3_14 | 14409 | 15242 | + | 3.A.1.1.20 |
| pfam | HRGMv2_1915_3 | HRGMv2_1915_3_15 | 15247 | 16749 | + | DUF4127 |
| TC | HRGMv2_1915_3 | HRGMv2_1915_3_16 | 16752 | 17861 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | HRGMv2_1915_3 | HRGMv2_1915_3_17 | 17870 | 18322 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1915_3 | HRGMv2_1915_3_18 | 18378 | 19325 | - | 2.A.69.4.5 |
Gene ID: HRGMv2_1915_3_6
Type: CAZyme
Location: 5495 - 6649 (-)
Type: CAZyme
Location: 5495 - 6649 (-)
Gene ID: HRGMv2_1915_3_7
Type: STP
Location: 6829 - 8004 (+)
Type: STP
Location: 6829 - 8004 (+)
Gene ID: HRGMv2_1915_3_8
Type: TC
Location: 8016 - 8456 (+)
Type: TC
Location: 8016 - 8456 (+)
Gene ID: HRGMv2_1915_3_9
Type: TF
Location: 8485 - 9264 (-)
Type: TF
Location: 8485 - 9264 (-)
Gene ID: HRGMv2_1915_3_10
Type: CAZyme
Location: 9261 - 10220 (-)
Type: CAZyme
Location: 9261 - 10220 (-)
Gene ID: HRGMv2_1915_3_11
Type: CAZyme
Location: 10338 - 12149 (+)
Type: CAZyme
Location: 10338 - 12149 (+)
Gene ID: HRGMv2_1915_3_12
Type: TC
Location: 12189 - 13445 (+)
Type: TC
Location: 12189 - 13445 (+)
Gene ID: HRGMv2_1915_3_13
Type: TC
Location: 13511 - 14416 (+)
Type: TC
Location: 13511 - 14416 (+)
Gene ID: HRGMv2_1915_3_14
Type: TC
Location: 14409 - 15242 (+)
Type: TC
Location: 14409 - 15242 (+)
Gene ID: HRGMv2_1915_3_15
Type: pfam
Location: 15247 - 16749 (+)
Type: pfam
Location: 15247 - 16749 (+)
Gene ID: HRGMv2_1915_3_16
Type: TC
Location: 16752 - 17861 (+)
Type: TC
Location: 16752 - 17861 (+)
Gene ID: HRGMv2_1915_3_17
Type:
Location: 17870 - 18322 (+)
Type:
Location: 17870 - 18322 (+)
Gene ID: HRGMv2_1915_3_18
Type: TC
Location: 18378 - 19325 (-)
Type: TC
Location: 18378 - 19325 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Bulleidia
Species
Bulleidia sp900554555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.