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Cluster: HRGMv2_1902_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1902_1 HRGMv2_1902_1_622 665317 667584 - GT35
CAZyme HRGMv2_1902_1 HRGMv2_1902_1_623 667761 669179 + GH77
pfam HRGMv2_1902_1 HRGMv2_1902_1_624 669264 670109 + BacA
pfam HRGMv2_1902_1 HRGMv2_1902_1_625 670537 671412 + Lipoprotein_9
TC HRGMv2_1902_1 HRGMv2_1902_1_626 671496 672461 + 3.A.1.24.2
TC HRGMv2_1902_1 HRGMv2_1902_1_627 672458 673099 + 3.A.1.24.5
Gene ID: HRGMv2_1902_1_622
Type: CAZyme
Location: 665317 - 667584 (-)
Gene ID: HRGMv2_1902_1_623
Type: CAZyme
Location: 667761 - 669179 (+)
Gene ID: HRGMv2_1902_1_624
Type: pfam
Location: 669264 - 670109 (+)
Gene ID: HRGMv2_1902_1_625
Type: pfam
Location: 670537 - 671412 (+)
Gene ID: HRGMv2_1902_1_626
Type: TC
Location: 671496 - 672461 (+)
Gene ID: HRGMv2_1902_1_627
Type: TC
Location: 672458 - 673099 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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