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Cluster: HRGMv2_1902_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1902_1 HRGMv2_1902_1_345 390081 390824 + 9.B.158.1.2
pfam HRGMv2_1902_1 HRGMv2_1902_1_346 390821 391957 + Gly_kinase
TC HRGMv2_1902_1 HRGMv2_1902_1_347 392064 393590 + 2.A.14.1.1
CAZyme HRGMv2_1902_1 HRGMv2_1902_1_348 393677 395086 + GH1
CAZyme HRGMv2_1902_1 HRGMv2_1902_1_349 395115 396593 + GH1
STP HRGMv2_1902_1 HRGMv2_1902_1_350 396681 397202 + Nitroreductase
TC HRGMv2_1902_1 HRGMv2_1902_1_351 398087 398797 - 1.A.8.2.8
Gene ID: HRGMv2_1902_1_345
Type: TC
Location: 390081 - 390824 (+)
Gene ID: HRGMv2_1902_1_346
Type: pfam
Location: 390821 - 391957 (+)
Gene ID: HRGMv2_1902_1_347
Type: TC
Location: 392064 - 393590 (+)
Gene ID: HRGMv2_1902_1_348
Type: CAZyme
Location: 393677 - 395086 (+)
Gene ID: HRGMv2_1902_1_349
Type: CAZyme
Location: 395115 - 396593 (+)
Gene ID: HRGMv2_1902_1_350
Type: STP
Location: 396681 - 397202 (+)
Gene ID: HRGMv2_1902_1_351
Type: TC
Location: 398087 - 398797 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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