Cluster: HRGMv2_1902_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1902
- CGC Family ID: CGCFAM_02891
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1902_1 | HRGMv2_1902_1_2065 | 2165800 | 2167107 | + | GH13_20 |
| pfam | HRGMv2_1902_1 | HRGMv2_1902_1_2066 | 2167140 | 2168009 | - | PseudoU_synth_2 |
| pfam | HRGMv2_1902_1 | HRGMv2_1902_1_2067 | 2168002 | 2169117 | - | RF-1 | PCRF |
| TC | HRGMv2_1902_1 | HRGMv2_1902_1_2068 | 2169117 | 2171480 | - | 3.A.5.1.3 |
| STP | HRGMv2_1902_1 | HRGMv2_1902_1_2069 | 2171554 | 2172156 | - | Pribosyltran |
| TC | HRGMv2_1902_1 | HRGMv2_1902_1_2070 | 2172144 | 2173292 | - | 3.A.11.1.2 |
Gene ID: HRGMv2_1902_1_2065
Type: CAZyme
Location: 2165800 - 2167107 (+)
Type: CAZyme
Location: 2165800 - 2167107 (+)
Gene ID: HRGMv2_1902_1_2066
Type: pfam
Location: 2167140 - 2168009 (-)
Type: pfam
Location: 2167140 - 2168009 (-)
Gene ID: HRGMv2_1902_1_2067
Type: pfam
Location: 2168002 - 2169117 (-)
Type: pfam
Location: 2168002 - 2169117 (-)
Gene ID: HRGMv2_1902_1_2068
Type: TC
Location: 2169117 - 2171480 (-)
Type: TC
Location: 2169117 - 2171480 (-)
Gene ID: HRGMv2_1902_1_2069
Type: STP
Location: 2171554 - 2172156 (-)
Type: STP
Location: 2171554 - 2172156 (-)
Gene ID: HRGMv2_1902_1_2070
Type: TC
Location: 2172144 - 2173292 (-)
Type: TC
Location: 2172144 - 2173292 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Bulleidia
Species
Bulleidia sp900539965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.