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Cluster: HRGMv2_1902_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1902_1 HRGMv2_1902_1_87 93559 96465 + GH2
pfam HRGMv2_1902_1 HRGMv2_1902_1_88 96499 97767 - SDH_alpha
TC HRGMv2_1902_1 HRGMv2_1902_1_89 97822 98673 + 2.A.115.1.5
pfam HRGMv2_1902_1 HRGMv2_1902_1_90 98749 99906 + MFS_1 | MFS_1_like
pfam HRGMv2_1902_1 HRGMv2_1902_1_91 99910 100533 - Hydrolase | HAD_2
TC HRGMv2_1902_1 HRGMv2_1902_1_92 100581 101249 - 9.B.143.2.3
NULL(UNKNOWN) HRGMv2_1902_1 HRGMv2_1902_1_93 101388 101897 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1902_1 HRGMv2_1902_1_94 101901 102155 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1902_1 HRGMv2_1902_1_95 102228 103094 + 2.A.115.1.1
Gene ID: HRGMv2_1902_1_87
Type: CAZyme
Location: 93559 - 96465 (+)
Gene ID: HRGMv2_1902_1_88
Type: pfam
Location: 96499 - 97767 (-)
Gene ID: HRGMv2_1902_1_89
Type: TC
Location: 97822 - 98673 (+)
Gene ID: HRGMv2_1902_1_90
Type: pfam
Location: 98749 - 99906 (+)
Gene ID: HRGMv2_1902_1_91
Type: pfam
Location: 99910 - 100533 (-)
Gene ID: HRGMv2_1902_1_92
Type: TC
Location: 100581 - 101249 (-)
Gene ID: HRGMv2_1902_1_93
Type:
Location: 101388 - 101897 (+)
Gene ID: HRGMv2_1902_1_94
Type:
Location: 101901 - 102155 (+)
Gene ID: HRGMv2_1902_1_95
Type: TC
Location: 102228 - 103094 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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