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Cluster: HRGMv2_1902_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1902_1 HRGMv2_1902_1_1347 1427638 1428801 - GH170
TC HRGMv2_1902_1 HRGMv2_1902_1_1348 1428877 1429806 - 3.A.1.5.19
TC HRGMv2_1902_1 HRGMv2_1902_1_1349 1429803 1430900 - 3.A.1.5.19
TC HRGMv2_1902_1 HRGMv2_1902_1_1350 1430911 1431927 - 3.A.1.5.19
TC HRGMv2_1902_1 HRGMv2_1902_1_1351 1431930 1432868 - 3.A.1.5.19
TC HRGMv2_1902_1 HRGMv2_1902_1_1352 1432929 1434530 - 3.A.1.5.25
Gene ID: HRGMv2_1902_1_1347
Type: CAZyme
Location: 1427638 - 1428801 (-)
Gene ID: HRGMv2_1902_1_1348
Type: TC
Location: 1428877 - 1429806 (-)
Gene ID: HRGMv2_1902_1_1349
Type: TC
Location: 1429803 - 1430900 (-)
Gene ID: HRGMv2_1902_1_1350
Type: TC
Location: 1430911 - 1431927 (-)
Gene ID: HRGMv2_1902_1_1351
Type: TC
Location: 1431930 - 1432868 (-)
Gene ID: HRGMv2_1902_1_1352
Type: TC
Location: 1432929 - 1434530 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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