dbCAN HGM

Cluster: HRGMv2_1902_CGC15

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1902_1	HRGMv2_1902_1_1241	1313479	1314924	+	9.B.18.1.2
CAZyme	HRGMv2_1902_1	HRGMv2_1902_1_1242	1315006	1316301	+	GT4
pfam	HRGMv2_1902_1	HRGMv2_1902_1_1243	1316294	1317139	+	Glycos_transf_2
NULL(UNKNOWN)	HRGMv2_1902_1	HRGMv2_1902_1_1244	1317136	1318326	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_1902_1	HRGMv2_1902_1_1245	1318323	1319231	+	GT2
CAZyme	HRGMv2_1902_1	HRGMv2_1902_1_1246	1319252	1320280	+	GT2
pfam	HRGMv2_1902_1	HRGMv2_1902_1_1247	1320284	1320784	+	Hexapep
CAZyme	HRGMv2_1902_1	HRGMv2_1902_1_1248	1320798	1321715	+	GT2
NULL(UNKNOWN)	HRGMv2_1902_1	HRGMv2_1902_1_1249	1321754	1322683	+	NULL(UNKNOWN) [View Structural Homologs]
pfam	HRGMv2_1902_1	HRGMv2_1902_1_1250	1322696	1323928	+	PS_pyruv_trans
TC	HRGMv2_1902_1	HRGMv2_1902_1_1251	1323930	1325480	+	2.A.66.1.40

Gene ID: HRGMv2_1902_1_1241
Type: TC
Location: 1313479 - 1314924 (+)

Gene ID: HRGMv2_1902_1_1242
Type: CAZyme
Location: 1315006 - 1316301 (+)

Gene ID: HRGMv2_1902_1_1243
Type: pfam
Location: 1316294 - 1317139 (+)

Gene ID: HRGMv2_1902_1_1244
Type:
Location: 1317136 - 1318326 (+)

Gene ID: HRGMv2_1902_1_1245
Type: CAZyme
Location: 1318323 - 1319231 (+)

Gene ID: HRGMv2_1902_1_1246
Type: CAZyme
Location: 1319252 - 1320280 (+)

Gene ID: HRGMv2_1902_1_1247
Type: pfam
Location: 1320284 - 1320784 (+)

Gene ID: HRGMv2_1902_1_1248
Type: CAZyme
Location: 1320798 - 1321715 (+)

Gene ID: HRGMv2_1902_1_1249
Type:
Location: 1321754 - 1322683 (+)

Gene ID: HRGMv2_1902_1_1250
Type: pfam
Location: 1322696 - 1323928 (+)

Gene ID: HRGMv2_1902_1_1251
Type: TC
Location: 1323930 - 1325480 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.