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Cluster: HRGMv2_1902_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1902_1 HRGMv2_1902_1_914 973971 977327 + 3.A.1.122.2
pfam HRGMv2_1902_1 HRGMv2_1902_1_915 977530 978894 + DUF349 | DUF349 | DUF349
TC HRGMv2_1902_1 HRGMv2_1902_1_916 979033 980373 + 2.A.38.4.3
TC HRGMv2_1902_1 HRGMv2_1902_1_917 980385 981041 + 2.A.38.4.4
STP HRGMv2_1902_1 HRGMv2_1902_1_918 981202 983160 + HATPase_c | HisKA
TF HRGMv2_1902_1 HRGMv2_1902_1_919 983150 983851 + Trans_reg_C
CAZyme HRGMv2_1902_1 HRGMv2_1902_1_920 983848 985263 + GH109
Gene ID: HRGMv2_1902_1_914
Type: TC
Location: 973971 - 977327 (+)
Gene ID: HRGMv2_1902_1_915
Type: pfam
Location: 977530 - 978894 (+)
Gene ID: HRGMv2_1902_1_916
Type: TC
Location: 979033 - 980373 (+)
Gene ID: HRGMv2_1902_1_917
Type: TC
Location: 980385 - 981041 (+)
Gene ID: HRGMv2_1902_1_918
Type: STP
Location: 981202 - 983160 (+)
Gene ID: HRGMv2_1902_1_919
Type: TF
Location: 983150 - 983851 (+)
Gene ID: HRGMv2_1902_1_920
Type: CAZyme
Location: 983848 - 985263 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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