Cluster: HRGMv2_1900_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_00057
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1900_7 | HRGMv2_1900_7_29 | 23440 | 25257 | + | 1.A.33.1.4 |
| pfam | HRGMv2_1900_7 | HRGMv2_1900_7_30 | 25319 | 26440 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| CAZyme | HRGMv2_1900_7 | HRGMv2_1900_7_31 | 27101 | 30898 | + | GH20 |
Gene ID: HRGMv2_1900_7_29
Type: TC
Location: 23440 - 25257 (+)
Type: TC
Location: 23440 - 25257 (+)
Gene ID: HRGMv2_1900_7_30
Type: pfam
Location: 25319 - 26440 (+)
Type: pfam
Location: 25319 - 26440 (+)
Gene ID: HRGMv2_1900_7_31
Type: CAZyme
Location: 27101 - 30898 (+)
Type: CAZyme
Location: 27101 - 30898 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_7_29 | vegetarian > vegan | 1.04073 | 0.03201 |
| HRGMv2_1900_7_30 | vegetarian > omnivore | 1.41152 | 0.02298 |