Cluster: HRGMv2_1900_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1900
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1900_6 | HRGMv2_1900_6_31 | 25866 | 27290 | - | GH13_5 |
| STP | HRGMv2_1900_6 | HRGMv2_1900_6_32 | 27383 | 28681 | + | AAA |
| STP | HRGMv2_1900_6 | HRGMv2_1900_6_33 | 28684 | 29193 | + | Nitroreductase | Nitroreductase |
| TC | HRGMv2_1900_6 | HRGMv2_1900_6_34 | 29204 | 29890 | + | 1.A.14.2.2 |
| TF | HRGMv2_1900_6 | HRGMv2_1900_6_35 | 30036 | 30833 | + | HTH_6 |
| CAZyme | HRGMv2_1900_6 | HRGMv2_1900_6_36 | 30936 | 32402 | + | CE1 |
Gene ID: HRGMv2_1900_6_31
Type: CAZyme
Location: 25866 - 27290 (-)
Type: CAZyme
Location: 25866 - 27290 (-)
Gene ID: HRGMv2_1900_6_32
Type: STP
Location: 27383 - 28681 (+)
Type: STP
Location: 27383 - 28681 (+)
Gene ID: HRGMv2_1900_6_33
Type: STP
Location: 28684 - 29193 (+)
Type: STP
Location: 28684 - 29193 (+)
Gene ID: HRGMv2_1900_6_34
Type: TC
Location: 29204 - 29890 (+)
Type: TC
Location: 29204 - 29890 (+)
Gene ID: HRGMv2_1900_6_35
Type: TF
Location: 30036 - 30833 (+)
Type: TF
Location: 30036 - 30833 (+)
Gene ID: HRGMv2_1900_6_36
Type: CAZyme
Location: 30936 - 32402 (+)
Type: CAZyme
Location: 30936 - 32402 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_6_32 | vegetarian > vegan | 1.03548 | 0.04212 |
| HRGMv2_1900_6_34 | vegan > omnivore | 2.19727 | 0.00186 |