Cluster: HRGMv2_1900_CGC6

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_1900_5	HRGMv2_1900_5_41	36881	38320	-	GH1
pfam	HRGMv2_1900_5	HRGMv2_1900_5_42	38448	39515	-	PFK
pfam	HRGMv2_1900_5	HRGMv2_1900_5_43	39525	41564	-	PP_kinase \| PP_kinase_N \| PP_kinase_C \| PLDc_2 \| PP_kinase_C_1
CAZyme	HRGMv2_1900_5	HRGMv2_1900_5_44	41764	43248	-	GH1
pfam	HRGMv2_1900_5	HRGMv2_1900_5_45	43354	44298	-	3HCDH \| 3HCDH_N
TC	HRGMv2_1900_5	HRGMv2_1900_5_46	44415	46985	-	9.B.74.1.3
TF	HRGMv2_1900_5	HRGMv2_1900_5_47	47137	47568	+	Rrf2
NULL(UNKNOWN)	HRGMv2_1900_5	HRGMv2_1900_5_48	47613	48206	-	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_1900_5	HRGMv2_1900_5_49	48218	48772	-	2.A.51.1.6

Gene ID: HRGMv2_1900_5_41
Type: CAZyme
Location: 36881 - 38320 (-)

Gene ID: HRGMv2_1900_5_42
Type: pfam
Location: 38448 - 39515 (-)

Gene ID: HRGMv2_1900_5_43
Type: pfam
Location: 39525 - 41564 (-)

Gene ID: HRGMv2_1900_5_44
Type: CAZyme
Location: 41764 - 43248 (-)

Gene ID: HRGMv2_1900_5_45
Type: pfam
Location: 43354 - 44298 (-)

Gene ID: HRGMv2_1900_5_46
Type: TC
Location: 44415 - 46985 (-)

Gene ID: HRGMv2_1900_5_47
Type: TF
Location: 47137 - 47568 (+)

Gene ID: HRGMv2_1900_5_48
Type:
Location: 47613 - 48206 (-)

Gene ID: HRGMv2_1900_5_49
Type: TC
Location: 48218 - 48772 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1900_5_45	vegan > omnivore	3.08474	0.00186
HRGMv2_1900_5_45	vegetarian > omnivore	2.32952	0.02014
HRGMv2_1900_5_47	vegan > omnivore	1.70638	0.00186
HRGMv2_1900_5_49	vegan > omnivore	1.29347	0.00186