Cluster: HRGMv2_1900_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1900
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1900_4 | HRGMv2_1900_4_91 | 94138 | 96369 | - | GT2 |
| pfam | HRGMv2_1900_4 | HRGMv2_1900_4_92 | 96384 | 96776 | - | CTP_transf_like |
| TC | HRGMv2_1900_4 | HRGMv2_1900_4_93 | 96787 | 97614 | - | 3.A.1.104.2 |
| TC | HRGMv2_1900_4 | HRGMv2_1900_4_94 | 97624 | 98442 | - | 3.A.1.104.1 |
Gene ID: HRGMv2_1900_4_91
Type: CAZyme
Location: 94138 - 96369 (-)
Type: CAZyme
Location: 94138 - 96369 (-)
Gene ID: HRGMv2_1900_4_92
Type: pfam
Location: 96384 - 96776 (-)
Type: pfam
Location: 96384 - 96776 (-)
Gene ID: HRGMv2_1900_4_93
Type: TC
Location: 96787 - 97614 (-)
Type: TC
Location: 96787 - 97614 (-)
Gene ID: HRGMv2_1900_4_94
Type: TC
Location: 97624 - 98442 (-)
Type: TC
Location: 97624 - 98442 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_4_92 | vegan > omnivore | 1.37462 | 0.00186 |
| HRGMv2_1900_4_93 | vegan > omnivore | 2.76219 | 0.00186 |
| HRGMv2_1900_4_93 | vegetarian > omnivore | 2.57235 | 0.02014 |