Cluster: HRGMv2_1900_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1900_74 | HRGMv2_1900_74_1 | 240 | 1502 | + | 9.B.18.2.1 |
| TC | HRGMv2_1900_74 | HRGMv2_1900_74_2 | 1553 | 2362 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_1900_74 | HRGMv2_1900_74_3 | 2362 | 3432 | + | GT4 |
| pfam | HRGMv2_1900_74 | HRGMv2_1900_74_4 | 3429 | 4556 | + | EpsG |
| CAZyme | HRGMv2_1900_74 | HRGMv2_1900_74_5 | 4553 | 5650 | + | GT4 |
| CAZyme | HRGMv2_1900_74 | HRGMv2_1900_74_6 | 5643 | 5972 | + | GT2 |
Gene ID: HRGMv2_1900_74_1
Type: TC
Location: 240 - 1502 (+)
Type: TC
Location: 240 - 1502 (+)
Gene ID: HRGMv2_1900_74_2
Type: TC
Location: 1553 - 2362 (+)
Type: TC
Location: 1553 - 2362 (+)
Gene ID: HRGMv2_1900_74_3
Type: CAZyme
Location: 2362 - 3432 (+)
Type: CAZyme
Location: 2362 - 3432 (+)
Gene ID: HRGMv2_1900_74_4
Type: pfam
Location: 3429 - 4556 (+)
Type: pfam
Location: 3429 - 4556 (+)
Gene ID: HRGMv2_1900_74_5
Type: CAZyme
Location: 4553 - 5650 (+)
Type: CAZyme
Location: 4553 - 5650 (+)
Gene ID: HRGMv2_1900_74_6
Type: CAZyme
Location: 5643 - 5972 (+)
Type: CAZyme
Location: 5643 - 5972 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.