Cluster: HRGMv2_1900_CGC41
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_00373
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1900_62 | HRGMv2_1900_62_4 | 1584 | 2108 | + | 2.A.87.3.1 |
| TF | HRGMv2_1900_62 | HRGMv2_1900_62_5 | 2118 | 3002 | + | HTH_6 |
| CAZyme | HRGMv2_1900_62 | HRGMv2_1900_62_6 | 3118 | 4518 | + | GH1 |
Gene ID: HRGMv2_1900_62_4
Type: TC
Location: 1584 - 2108 (+)
Type: TC
Location: 1584 - 2108 (+)
Gene ID: HRGMv2_1900_62_5
Type: TF
Location: 2118 - 3002 (+)
Type: TF
Location: 2118 - 3002 (+)
Gene ID: HRGMv2_1900_62_6
Type: CAZyme
Location: 3118 - 4518 (+)
Type: CAZyme
Location: 3118 - 4518 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_62_4 | vegan > omnivore | 15.99998 | 0.00186 |