Cluster: HRGMv2_1900_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_00373
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1900_4 | HRGMv2_1900_4_35 | 37900 | 39312 | - | GH1 |
| TF | HRGMv2_1900_4 | HRGMv2_1900_4_36 | 39477 | 40352 | + | HTH_6 |
| TC | HRGMv2_1900_4 | HRGMv2_1900_4_37 | 40400 | 41965 | - | 2.A.14.1.1 |
Gene ID: HRGMv2_1900_4_35
Type: CAZyme
Location: 37900 - 39312 (-)
Type: CAZyme
Location: 37900 - 39312 (-)
Gene ID: HRGMv2_1900_4_36
Type: TF
Location: 39477 - 40352 (+)
Type: TF
Location: 39477 - 40352 (+)
Gene ID: HRGMv2_1900_4_37
Type: TC
Location: 40400 - 41965 (-)
Type: TC
Location: 40400 - 41965 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_4_36 | vegan > omnivore | 2.52497 | 0.00186 |