Cluster: HRGMv2_1900_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1900
- CGC Family ID: CGCFAM_02068
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1900_58 | HRGMv2_1900_58_1 | 1 | 1437 | + | 4.A.1.1.7 |
| pfam | HRGMv2_1900_58 | HRGMv2_1900_58_2 | 1449 | 2279 | + | PRD | PRD | CAT_RBD |
| CAZyme | HRGMv2_1900_58 | HRGMv2_1900_58_3 | 2431 | 7287 | + | CBM32 | CBM32 | CBM32 | GH20 |
| CAZyme | HRGMv2_1900_58 | HRGMv2_1900_58_4 | 7542 | 13169 | + | GH84 |
Gene ID: HRGMv2_1900_58_1
Type: TC
Location: 1 - 1437 (+)
Type: TC
Location: 1 - 1437 (+)
Gene ID: HRGMv2_1900_58_2
Type: pfam
Location: 1449 - 2279 (+)
Type: pfam
Location: 1449 - 2279 (+)
Gene ID: HRGMv2_1900_58_3
Type: CAZyme
Location: 2431 - 7287 (+)
Type: CAZyme
Location: 2431 - 7287 (+)
Gene ID: HRGMv2_1900_58_4
Type: CAZyme
Location: 7542 - 13169 (+)
Type: CAZyme
Location: 7542 - 13169 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Species
Faecalibacillus sp900544435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1900_58_3 | vegan > omnivore | 1.13573 | 0.00186 |